PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe5G269000.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family bHLH
Protein Properties Length: 226aa    MW: 25288.1 Da    PI: 4.9931
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe5G269000.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH41.62.2e-13161206655
                        HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                        +++Er RR ri +++ +L+el+P+     +k  + a++Le+AveY+k Lq
  Aqcoe5G269000.1.p 161 SIAERVRRTRISDRIRKLQELVPNM----DKQTNTADMLEEAVEYVKFLQ 206
                        689*********************7....688*****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.958155205IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.1E-16158215IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.35E-12159210No hitNo description
Gene3DG3DSA:4.10.280.108.7E-17160217IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.4E-13161211IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.1E-10161206IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0042335Biological Processcuticle development
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    Send to blast
MGYGSGSGSG LARFKSAPVS WFDSLLQEDD EVLPLQLPQT QCVSQAPNLR NSNIYDPTNL  60
FDTSSTFTRN NSSPPELLAN LTSPSPNLAS DDGVASNYDI LSFLDIPTTG KLERESDSSH  120
ESQLKKEHSD SFSDMDMEKL FQDSVPCRVR AKRGCATHPR SIAERVRRTR ISDRIRKLQE  180
LVPNMDKQTN TADMLEEAVE YVKFLQNQIQ ELTEHQKNCK CLGRE*
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00181DAPTransfer from AT1G35460Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010242689.16e-75PREDICTED: transcription factor bHLH80
SwissprotQ9C8P87e-64BH080_ARATH; Transcription factor bHLH80
TrEMBLA0A0B0NRZ34e-74A0A0B0NRZ3_G
STRINGSolyc06g065040.2.18e-64(Solanum lycopersicum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G35460.13e-54bHLH family protein